comparison rename_tracks.py @ 1:72ccb2f848a0 draft default tip

planemo upload commit 869adf4bb92923a8a5cb0d62ae40cdab9bf6e1d7

0:8b19a698d90e

    writer = open(renamedFile, 'w')
    with open(inputFile, 'r') as f:
        lines = f.readlines()
        for l in lines:
            if not l.startswith("#"):
                scaffold_name = l.split()[0]
                if scaffold_name in nameDict:
                    l = l.replace(scaffold_name, nameDict[scaffold_name])
            writer.write(l)
    writer.close()

1:72ccb2f848a0

    writer = open(renamedFile, 'w')
    with open(inputFile, 'r') as f:
        lines = f.readlines()
        for l in lines:
            if not l.startswith("#"):
                scaffold_name = l.split('\t')[0]
                if scaffold_name in nameDict:
                    l = l.replace(scaffold_name, nameDict[scaffold_name])
            writer.write(l)
    writer.close()