# HG changeset patch # User yating-l # Date 1532632562 14400 # Node ID 72ccb2f848a025c9dd5a10ef6ba219564a09011b # Parent 8b19a698d90efe670df4662a41de078da02e80c7 planemo upload commit 869adf4bb92923a8a5cb0d62ae40cdab9bf6e1d7 diff -r 8b19a698d90e -r 72ccb2f848a0 rename_tracks.py --- a/rename_tracks.py Mon Jun 25 15:01:41 2018 -0400 +++ b/rename_tracks.py Thu Jul 26 15:16:02 2018 -0400 @@ -14,7 +14,7 @@ lines = f.readlines() for l in lines: if not l.startswith("#"): - scaffold_name = l.split()[0] + scaffold_name = l.split('\t')[0] if scaffold_name in nameDict: l = l.replace(scaffold_name, nameDict[scaffold_name]) writer.write(l) diff -r 8b19a698d90e -r 72ccb2f848a0 rename_tracks.pyc Binary file rename_tracks.pyc has changed diff -r 8b19a698d90e -r 72ccb2f848a0 rename_tracks.xml --- a/rename_tracks.xml Mon Jun 25 15:01:41 2018 -0400 +++ b/rename_tracks.xml Thu Jul 26 15:16:02 2018 -0400 @@ -1,4 +1,4 @@ - + a Galaxy tool to rename the scaffold names in the custom track files samtools