Mercurial > repos > yating-l > snap

diff tool_dependencies.xml @ 0:57299471d6c1 draft default tip

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload commit 402a746f69e9f1dbb57007536fc36dc6ce3180de
author yating-l
date Wed, 12 Apr 2017 17:37:47 -0400
parents
children
line wrap: on
line diff
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool_dependencies.xml	Wed Apr 12 17:37:47 2017 -0400
@@ -0,0 +1,25 @@
+<?xml version="1.0"?>
+<tool_dependency>
+    <package name="snap" version="1.0">
+        <install version="1.0">
+            <actions_group>
+                <actions>
+                    <action type="download_by_url">http://korflab.ucdavis.edu/Software/snap-2013-11-29.tar.gz</action>
+                    <action type="shell_command">make</action>
+                    <action type="move_directory_files">
+                        <source_directory>.</source_directory>
+                        <destination_directory>$INSTALL_DIR</destination_directory>
+                    </action>
+                    <action type="set_environment">
+                        <environment_variable name="ZOE" action="set_to">$INSTALL_DIR</environment_variable>
+                        <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR</environment_variable>
+                    </action>
+                </actions>
+            </actions_group>
+        </install>
+        <readme>SNAP is a general purpose gene finding program suitable for both eukaryotic
+            and prokaryotic genomes. SNAP is an acroynm for Semi-HMM-based Nucleic Acid
+            Parser.
+        </readme>
+    </package>
+</tool_dependency>