Mercurial > repos > yating-l > ucsc_pslcdnafilter

diff tool_dependencies.xml @ 0:ceec5a5fe894 draft default tip

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planemo upload commit 46cd27d5fb1b88220fb94b9039a685359b87d539-dirty
author yating-l
date Wed, 12 Apr 2017 17:50:21 -0400
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool_dependencies.xml	Wed Apr 12 17:50:21 2017 -0400
@@ -0,0 +1,27 @@
+<?xml version="1.0"?>
+<tool_dependency>
+    <!-- required tools:
+        - blat
+        - sort
+        - pslReps
+        - faPolyASizes
+        - pslCDnaFilter
+    -->
+    <package name="ucsc_tools_340_for_BLAT" version="1.0">
+        <install version="1.0">
+            <actions_group>
+                <actions architecture="x86_64" os="linux">
+                    <action type="download_by_url">http://old-gep.wustl.edu/~galaxy/package_ucsc_tools_340_for_BLAT.tar.gz</action>
+                    <action type="move_directory_files">
+                        <source_directory>.</source_directory>
+                        <destination_directory>$INSTALL_DIR/bin</destination_directory>
+                    </action>
+                </actions>
+                <action type="set_environment">
+                    <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
+                </action>
+            </actions_group>
+        </install>
+        <readme>The tools and utilities were created by the UCSC Genome Bioinformatics Group</readme>
+    </package>
+</tool_dependency>
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