comparison metams_runGC.xml @ 2:8e1b99a7d733 draft

Bug fix on RI file format
author yguitton
date Wed, 24 May 2017 07:39:18 -0400
parents 142fbe102a9d
children c75532b75ba1
comparison
equal deleted inserted replaced
1:142fbe102a9d 2:8e1b99a7d733
1 <tool id="metams_runGC" name="metaMS.runGC" version="2.0"> 1 <tool id="metams_runGC" name="metaMS.runGC" version="2.1">
2 2
3 <description>GC-MS data preprocessing using metaMS package</description> 3 <description>GC-MS data preprocessing using metaMS package</description>
4 4
5 <requirements> 5 <requirements>
6 <requirement type="package" version="1.8.0">bioconductor-metams</requirement> 6 <requirement type="package" version="1.8.0">bioconductor-metams</requirement>
106 <param name="option" type="select" label="Use RI option " > 106 <param name="option" type="select" label="Use RI option " >
107 <option value="show">show</option> 107 <option value="show">show</option>
108 <option value="hide" selected="true">hide</option> 108 <option value="hide" selected="true">hide</option>
109 </param> 109 </param>
110 <when value="show"> 110 <when value="show">
111 <param name="ri_input" type="data" format="csv,tsv,gg" label=" RI file" help="A file with two column (rt and RI) with rt in minutes as needed for RI option in runGC" /> 111 <param name="ri_input" type="data" format="tabular,txt,csv,tsv,gg" label=" RI file" help="A file with two column (rt and RI) with rt in minutes as needed for RI option in runGC" />
112 </when> 112 </when>
113 <when value="hide" /> 113 <when value="hide" />
114 </conditional> 114 </conditional>
115 </when> 115 </when>
116 <when value="usersettings"> 116 <when value="usersettings">
147 <param name="option" type="select" label="Use RI option " > 147 <param name="option" type="select" label="Use RI option " >
148 <option value="show">show</option> 148 <option value="show">show</option>
149 <option value="hide" selected="true">hide</option> 149 <option value="hide" selected="true">hide</option>
150 </param> 150 </param>
151 <when value="show"> 151 <when value="show">
152 <param name="ri_input" type="data" format="csv,tsv,gg" label=" RI file" help="A file with two column (rt and RI) with rt in minutes as needed for RI option in runGC" /> 152 <param name="ri_input" type="data" format="tabular,txt,csv,tsv,gg" label=" RI file" help="A file with two column (rt and RI) with rt in minutes as needed for RI option in runGC" />
153 153
154 </when> 154 </when>
155 <when value="hide" /> 155 <when value="hide" />
156 156
157 </conditional> 157 </conditional>