Mercurial > repos > yhoogstrate > crossmap
comparison test-data/test_vcf_01_output.vcf @ 0:bfcdabc062ca draft
planemo upload for repository https://github.com/ErasmusMC-Bioinformatics/crossmap_galaxy_wrapper commit d4e9fe61901a612c78d9f26f172537b27fd2ddbb
| author | yhoogstrate |
|---|---|
| date | Wed, 26 Aug 2015 11:04:47 -0400 |
| parents | |
| children |
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| -1:000000000000 | 0:bfcdabc062ca |
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| 1 ##fileformat=VCFv4.2 | |
| 2 ##FORMAT=<ID=GT,Number=1,Type=Integer,Description="Genotype"> | |
| 3 ##FORMAT=<ID=GP,Number=G,Type=Float,Description="Genotype Probabilities"> | |
| 4 ##FORMAT=<ID=PL,Number=G,Type=Float,Description="Phred-scaled Genotype Likelihoods"> | |
| 5 ##liftOverProgram=CrossMap(https://sourceforge.net/projects/crossmap/) | |
| 6 ##liftOverFile=test_vcf_01.over.chain | |
| 7 ##new_reference_genome=test_vcf_01.fasta | |
| 8 ##liftOverTime=August13,2015 | |
| 9 #CHROM POS ID REF ALT QUAL FILTER INFO FORMAT SAMP001 SAMP002 | |
| 10 2 227 rs11449 C A . PASS . GT 0/0 0/1 | |
| 11 2 137 rs84825 T C . PASS . GT:GP 0/1:. 0/1:0.03,0.97,0 | |
| 12 2 36 rs84823 C G . PASS . GT:PL ./.:. 1/1:10,5,0 |