Mercurial > repos > yhoogstrate > flaimapper

view README.rst @ 5:79dcb1e0be6b draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Uploaded
author yhoogstrate
date Fri, 31 Jul 2015 05:31:02 -0400
parents d6abffbc9ee7
children
line wrap: on
line source

FlaiMapper wrapper for Galaxy
=============================

https://github.com/yhoogstrate/flaimapper
http://www.ncbi.nlm.nih.gov/pubmed/25338717
http://dx.doi.org/10.1093/bioinformatics/btu696

Fragment Location Annotation Identification Mapper

FlaiMapper: computational annotation of small ncRNA-derived fragments using RNA-seq high-throughput data.

Development
-----------

* Repository-Maintainer: Youri Hoogstrate
* Repository-Developers: Youri Hoogstrate

* Repository-Development: https://bitbucket.org/EMCbioinf/galaxy-tool-shed-tools

The tool wrapper has been written by Youri Hoogstrate from the Erasmus
Medical Center (Rotterdam, Netherlands).

License
-------

**flaimapper** and **wrapper**:

GPL (>=3)

**pysam**:

The MIT License

References
----------
**FlaiMapper: computational annotation of small ncRNA-derived fragments using RNA-seq high-throughput data.**

*Youri Hoogstrate, Guido Jenster, and Elena S. Martens-Uzunova* - Bioinformatics (2015) 31 (5): 665-673

- http://www.ncbi.nlm.nih.gov/pubmed/25338717
- http://dx.doi.org/10.1093/bioinformatics/btu696