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view test-data/test2/test_genomic_flaimapper_output.txt @ 5:79dcb1e0be6b draft

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author yhoogstrate
date Fri, 31 Jul 2015 05:31:02 -0400
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Fragment	Size	Reference sequence	Start	End	Precursor	Start in precursor	End in precursor	Sequence	Corresponding-reads (start)	Corresponding-reads (end)	Corresponding-reads (total)
ncRNA_1_chr1_Fragment_1	30	chr1	220	249	ncRNA_1	120	149	GGATAGTGCCAAAGCTCACTCACCACTGCC	10	9	19
ncRNA_2_chr1_Fragment_1	30	chr1	220	249	ncRNA_2	20	49	GGATAGTGCCAAAGCTCACTCACCACTGCC	10	9	19
ncRNA_2_chr1_Fragment_2	30	chr1	260	289	ncRNA_2	60	89	GCTTACCTCTAGAATAAGTGTCAGCCAGTA	10	10	20
ncRNA_3_chr1_Fragment_1	30	chr1	400	429	ncRNA_3	50	79	atacgtggcatttcaggaggcggccggagg	10	10	20
ncRNA_4_chr22_Fragment_1	50	chr22	100	149	ncRNA_4	0	49	AGATACAGTGTCTTTGACACGTTTATGGATTACAGCAATCACATCCAAGA	10	10	20
ncRNA_5_chr22_Fragment_1	30	chr22	370	399	ncRNA_5	170	199	TCTTGAGTGTTAAAATGTTGACCCCTGTAT	10	10	20
ncRNA_6_chrY_Fragment_1	30	chrY	0	29	ncRNA_6	0	29	TTGGGATGCGGGTAGTAGATGACTGCAGGG	10	9	19