diff tool_dependencies.xml @ 1:54ce44828e1b draft

planemo upload for repository https://bitbucket.org/EMCbioinf/galaxy-tool-shed-tools/raw/master/fuma commit a88597518f3715c0b22283f6f31757205efcb8d0-dirty

--- a/tool_dependencies.xml	Thu May 21 09:56:41 2015 -0400
+++ b/tool_dependencies.xml	Mon Jun 01 06:45:40 2015 -0400
@@ -1,29 +1,6 @@
 <?xml version="1.0"?>
 <tool_dependency>
 	<package name="fuma" version="2.7.1">
-		<install version="1.0">
-			<actions>
-				<action type="make_directory">$INSTALL_DIR/lib/python</action>
-				<action type="make_directory">$INSTALL_DIR/lib64/python</action>
-				
-				<action type="shell_command">
-					git clone https://github.com/yhoogstrate/fuma.git fuma &amp;&amp;
-					cd fuma &amp;&amp;
-					git reset --hard 3d9a0532209d4ad10283cac324788b4fecfd2675 &amp;&amp;
-					
-					export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR/lib/python:$INSTALL_DIR/lib64/python &amp;&amp;
-					python setup.py build &amp;&amp;
-					python setup.py install --home $INSTALL_DIR --install-scripts $INSTALL_DIR/bin
-				</action>
-				
-				<action type="set_environment">
-					<environment_variable action="append_to" name="PYTHONPATH">$INSTALL_DIR/lib/python:$INSTALL_DIR/lib64/python</environment_variable>
-					<environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable>
-				</action>
-			</actions>
-		</install>
-		<readme>
-			Downloads and installs Fuma; requires python pip and get to be installed.
-		</readme>
+		<repository changeset_revision="d728db4c0214" name="package_fuma_2_7_1" owner="yhoogstrate" toolshed="https://toolshed.g2.bx.psu.edu" />
 	</package>
 </tool_dependency>