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view test-data/SNORD48-revised.scan-for-segments.txt @ 5:b7cf9b172cfe draft

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planemo upload for repository https://github.com/ErasmusMC-Bioinformatics/segmentation_fold_galaxy_wrapper commit b97b90c692604239ed6e9423655c6c5d05798b32-dirty
author yhoogstrate
date Wed, 03 Aug 2016 04:54:40 -0400
parents 63df1e23f4ff
children 4d16cf9414cf
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>SNORD48 revised (2 extra bases on 5' end) x Kt-7 G2nA SAM riboswitch (H. marismortui)
GGAGUGAUGAUGACCCCAGGUAACUCUUGAGUGUGUCGCUGAUGCCAUCACCGCAGCGCUCUGACC
>SNORD48 revised (2 extra bases on 5' end) x Kt-7 (T. thermophilus)
GGAGUGAUGAUGACCCCAGGUAACUCUUGAGUGUGUCGCUGAUGCCAUCACCGCAGCGCUCUGACC
>SNORD48 revised (2 extra bases on 5' end) x Kt-7 (E. coli)
GGAGUGAUGAUGACCCCAGGUAACUCUUGAGUGUGUCGCUGAUGCCAUCACCGCAGCGCUCUGACC
>SNORD48 revised (2 extra bases on 5' end) x Kt-7 (D. radiodurans)
GGAGUGAUGAUGACCCCAGGUAACUCUUGAGUGUGUCGCUGAUGCCAUCACCGCAGCGCUCUGACC
>SNORD48 revised (2 extra bases on 5' end) x Kt-11 (T. thermophilus)
GGAGUGAUGAUGACCCCAGGUAACUCUUGAGUGUGUCGCUGAUGCCAUCACCGCAGCGCUCUGACC
>SNORD48 revised (2 extra bases on 5' end) x Kt-11.eco
GGAGUGAUGAUGACCCCAGGUAACUCUUGAGUGUGUCGCUGAUGCCAUCACCGCAGCGCUCUGACC
>SNORD48 revised (2 extra bases on 5' end) x Kt-15.hma
GGAGUGAUGAUGACCCCAGGUAACUCUUGAGUGUGUCGCUGAUGCCAUCACCGCAGCGCUCUGACC
>SNORD48 revised (2 extra bases on 5' end) x Kt-23.tth
GGAGUGAUGAUGACCCCAGGUAACUCUUGAGUGUGUCGCUGAUGCCAUCACCGCAGCGCUCUGACC
>SNORD48 revised (2 extra bases on 5' end) x Kt-23.eco
GGAGUGAUGAUGACCCCAGGUAACUCUUGAGUGUGUCGCUGAUGCCAUCACCGCAGCGCUCUGACC
>SNORD48 revised (2 extra bases on 5' end) x Kt-38.hma
GGAGUGAUGAUGACCCCAGGUAACUCUUGAGUGUGUCGCUGAUGCCAUCACCGCAGCGCUCUGACC
>SNORD48 revised (2 extra bases on 5' end) x Kt-42.hma
GGAGUGAUGAUGACCCCAGGUAACUCUUGAGUGUGUCGCUGAUGCCAUCACCGCAGCGCUCUGACC
>SNORD48 revised (2 extra bases on 5' end) x Kt-42.tth
GGAGUGAUGAUGACCCCAGGUAACUCUUGAGUGUGUCGCUGAUGCCAUCACCGCAGCGCUCUGACC
>SNORD48 revised (2 extra bases on 5' end) x Kt-42.dra
GGAGUGAUGAUGACCCCAGGUAACUCUUGAGUGUGUCGCUGAUGCCAUCACCGCAGCGCUCUGACC
>SNORD48 revised (2 extra bases on 5' end) x Kt-42.eco
GGAGUGAUGAUGACCCCAGGUAACUCUUGAGUGUGUCGCUGAUGCCAUCACCGCAGCGCUCUGACC
>SNORD48 revised (2 extra bases on 5' end) x Kt-46.hma
GGAGUGAUGAUGACCCCAGGUAACUCUUGAGUGUGUCGCUGAUGCCAUCACCGCAGCGCUCUGACC
>SNORD48 revised (2 extra bases on 5' end) x Kt-46.tth
GGAGUGAUGAUGACCCCAGGUAACUCUUGAGUGUGUCGCUGAUGCCAUCACCGCAGCGCUCUGACC
>SNORD48 revised (2 extra bases on 5' end) x Kt-46.dra
GGAGUGAUGAUGACCCCAGGUAACUCUUGAGUGUGUCGCUGAUGCCAUCACCGCAGCGCUCUGACC
>SNORD48 revised (2 extra bases on 5' end) x Kt-46.eco
GGAGUGAUGAUGACCCCAGGUAACUCUUGAGUGUGUCGCUGAUGCCAUCACCGCAGCGCUCUGACC
>SNORD48 revised (2 extra bases on 5' end) x Kt-58.hma
GGAGUGAUGAUGACCCCAGGUAACUCUUGAGUGUGUCGCUGAUGCCAUCACCGCAGCGCUCUGACC
>SNORD48 revised (2 extra bases on 5' end) x Kt-U4a.hsa
GGAGUGAUGAUGACCCCAGGUAACUCUUGAGUGUGUCGCUGAUGCCAUCACCGCAGCGCUCUGACC
>SNORD48 revised (2 extra bases on 5' end) x Kt-U4b.hsa
GGAGUGAUGAUGACCCCAGGUAACUCUUGAGUGUGUCGCUGAUGCCAUCACCGCAGCGCUCUGACC
>SNORD48 revised (2 extra bases on 5' end) x Kt-CD-box.CGU
GGAGUGAUGAUGACCCCAGGUAACUCUUGAGUGUGUCGCUGAUGCCAUCACCGCAGCGCUCUGACC
>SNORD48 revised (2 extra bases on 5' end) x Kt-CD-box.UGU
GGAGUGAUGAUGACCCCAGGUAACUCUUGAGUGUGUCGCUGAUGCCAUCACCGCAGCGCUCUGACC
>SNORD48 revised (2 extra bases on 5' end) x Kt-L30e.sce
GGAGUGAUGAUGACCCCAGGUAACUCUUGAGUGUGUCGCUGAUGCCAUCACCGCAGCGCUCUGACC
>SNORD48 revised (2 extra bases on 5' end) x Kt-SAM-ribo.tte
GGAGUGAUGAUGACCCCAGGUAACUCUUGAGUGUGUCGCUGAUGCCAUCACCGCAGCGCUCUGACC
>SNORD48 revised (2 extra bases on 5' end) x Kt-T-box.bsu
GGAGUGAUGAUGACCCCAGGUAACUCUUGAGUGUGUCGCUGAUGCCAUCACCGCAGCGCUCUGACC
>SNORD48 revised (2 extra bases on 5' end) x Kt-c-di-GMP-II.cac
GGAGUGAUGAUGACCCCAGGUAACUCUUGAGUGUGUCGCUGAUGCCAUCACCGCAGCGCUCUGACC
>SNORD48 revised (2 extra bases on 5' end) x Kt-G2nA-SAM-riboswitch (T. tengcongensi)
GGAGUGAUGAUGACCCCAGGUAACUCUUGAGUGUGUCGCUGAUGCCAUCACCGCAGCGCUCUGACC