Mercurial > repos > ylebras > xls2tabular

changeset 14:0e1b2a65ffdc draft

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Uploaded
author ylebras
date Wed, 05 Dec 2018 15:48:23 -0500
parents 6faa8b922ac4
children 80cce9439f6e
files xlsx2tab.xml
diffstat 1 files changed, 2 insertions(+), 3 deletions(-) [+]
line wrap: on
line diff
--- a/xlsx2tab.xml	Wed Dec 05 15:48:11 2018 -0500
+++ b/xlsx2tab.xml	Wed Dec 05 15:48:23 2018 -0500
@@ -4,11 +4,10 @@
 		<requirement type="package" version="1.1.0">r-readxl</requirement>
     </requirements>
     <command detect_errors="exit_code"><![CDATA[
-        cp '$input1' '$output' &&
-        Rscript '$__tool_directory__/xlsx2tab.R' input.xlsx '$sheet' '$output' ]]>
+        Rscript '$__tool_directory__/xlsx2tab.R' '$input1' '$sheet' '$output' ]]>
     </command>
     <inputs>
-        <param format="xlsx" name="input1" type="data" label="XLSX file"/>
+        <param format="xls" name="input1" type="data" label="XLS file"/>
         <param name="sheet" type="text" label="Excel sheet name" value="biodiv_data">
             <sanitizer sanitize="False"/>
         </param>