view plot_distribution.xml @ 3:f180c4ef9128 draft default tip

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author ynewton
date Fri, 18 Jan 2013 12:18:45 -0500
parents 81d08949af15
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<tool id="matrix_normalize" name="Plot Distribution" version="1.1.0">
  <description>Plot Distribution</description>
  <command interpreter="Rscript">plot_distribution.r $tableData $outfile
  </command>
  <inputs>
	  <param name="tableData" format="tabular" type="data" label="Input data"/>
  </inputs>
  <outputs>
      <data name="outfile" format="pdf"/>
  </outputs>
  <help>
**What it does**

This tool outputs histogram and distribution of tabular data. Assumes that the first row contains column headers and the first column contains row annotations (e.g. gene names). Considers everything else as data. Data can be either a single column or a matrix of values. Produces a pdf file. 

  </help>   
</tool>