Mercurial > repos > ynewton > plot_distribution

changeset 1:81d08949af15 draft

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Uploaded
author ynewton
date Thu, 13 Dec 2012 11:25:25 -0500
parents f91478b63ec6
children cf8d0d54bc78
files plot_distribution.xml
diffstat 1 files changed, 17 insertions(+), 0 deletions(-) [+]
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+++ b/plot_distribution.xml	Thu Dec 13 11:25:25 2012 -0500
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+<tool id="matrix_normalize" name="Plot Distributuion" version="1.0.1">
+  <description>Plot Distribution</description>
+  <command interpreter="Rscript">plot_distribution.r $tableData $outfile
+  </command>
+  <inputs>
+	  <param name="tableData" format="tabular" type="data" label="Input data"/>
+  </inputs>
+  <outputs>
+      <data name="outfile" format="pdf"/>
+  </outputs>
+  <help>
+**What it does**
+
+This tool outputs histogram and distribution of tabular data. Assumes that the first row contains column headers and the first column contains row annotations (e.g. gene names). Considers everything else as data. Data can be either a single column or a matrix of values. Produces a pdf file. 
+
+  </help>   
+</tool>
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