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1 # Optional configure Makefile overrides for htslib.
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2 #
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3 # Copyright (C) 2015 Genome Research Ltd.
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4 #
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5 # Author: John Marshall <jm18@sanger.ac.uk>
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6 #
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7 # Permission is hereby granted, free of charge, to any person obtaining a copy
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8 # of this software and associated documentation files (the "Software"), to deal
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9 # in the Software without restriction, including without limitation the rights
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10 # to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
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11 # copies of the Software, and to permit persons to whom the Software is
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12 # furnished to do so, subject to the following conditions:
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13 #
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14 # The above copyright notice and this permission notice shall be included in
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15 # all copies or substantial portions of the Software.
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16 #
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17 # THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
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18 # IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
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19 # FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL
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20 # THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
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21 # LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING
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22 # FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER
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23 # DEALINGS IN THE SOFTWARE.
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24
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25 # This is @configure_input@
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26 #
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27 # If you use configure, this file overrides variables and augments rules
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28 # in the Makefile to reflect your configuration choices. If you don't run
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29 # configure, the main Makefile contains suitable conservative defaults.
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30
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31 prefix = @prefix@
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32 exec_prefix = @exec_prefix@
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33 bindir = @bindir@
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34 includedir = @includedir@
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35 libdir = @libdir@
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36 datarootdir = @datarootdir@
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37 mandir = @mandir@
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38
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39 CC = @CC@
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40 RANLIB = @RANLIB@
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41
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42 CFLAGS = @CFLAGS@
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43 LDFLAGS = @LDFLAGS@
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44 LDLIBS = @LIBS@
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45
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46
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47 # ifeq/.../endif, +=, and target-specific variables are GNU Make-specific.
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48 # If you don't have GNU Make, comment out this conditional and note that
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49 # to enable iRODS you will need to implement the following elsewhere.
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50 ifeq "iRODS-@irods@" "iRODS-enabled"
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51
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52 @define_IRODS_HOME@
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53
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54 EXTRA_CPPFLAGS_IRODS = \
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55 -I$(IRODS_HOME)/lib/api/include \
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56 -I$(IRODS_HOME)/lib/core/include \
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57 -I$(IRODS_HOME)/lib/md5/include \
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58 -I$(IRODS_HOME)/lib/sha1/include \
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59 -I$(IRODS_HOME)/server/core/include \
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60 -I$(IRODS_HOME)/server/drivers/include \
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61 -I$(IRODS_HOME)/server/icat/include
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62
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63 LDFLAGS += -L$(IRODS_HOME)/lib/core/obj
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64 LDLIBS += -lRodsAPIs -lgssapi_krb5
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65
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66 LIBHTS_OBJS += hfile_irods.o
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67
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68 hfile.o hfile.pico: CPPFLAGS += -DHAVE_IRODS
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69
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70 hfile_irods.o hfile_irods.pico: CPPFLAGS += $(EXTRA_CPPFLAGS_IRODS)
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71
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72 endif
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