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     1 /*
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     2 Copyright (c) 2009-2013 Genome Research Ltd.
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     3 Author: James Bonfield <jkb@sanger.ac.uk>
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     4 
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     5 Redistribution and use in source and binary forms, with or without 
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     6 modification, are permitted provided that the following conditions are met:
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     7 
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     8    1. Redistributions of source code must retain the above copyright notice, 
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     9 this list of conditions and the following disclaimer.
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    10 
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    11    2. Redistributions in binary form must reproduce the above copyright notice, 
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    12 this list of conditions and the following disclaimer in the documentation 
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    13 and/or other materials provided with the distribution.
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    14 
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    15    3. Neither the names Genome Research Ltd and Wellcome Trust Sanger
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    16 Institute nor the names of its contributors may be used to endorse or promote
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    17 products derived from this software without specific prior written permission.
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    18 
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    19 THIS SOFTWARE IS PROVIDED BY GENOME RESEARCH LTD AND CONTRIBUTORS "AS IS" AND 
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    20 ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED 
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    21 WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE 
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    22 DISCLAIMED. IN NO EVENT SHALL GENOME RESEARCH LTD OR CONTRIBUTORS BE LIABLE
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    23 FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL
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    24 DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR
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    25 SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER
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    26 CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY,
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    27 OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE
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    28 OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
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    29 */
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    30 
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    31 #ifndef _ZFIO_H_
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    32 #define _ZFIO_H_
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    33 
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    34 #include <stdio.h>
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    35 #include <zlib.h>
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    36 
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    37 /*
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    38  * Either a gzFile or a FILE.
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    39  */
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    40 typedef struct {
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    41     FILE   *fp;
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    42     gzFile  gz;
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    43 } zfp;
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    44 
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    45 off_t zftello(zfp *zf);
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    46 int zfseeko(zfp *zf, off_t offset, int whence);
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    47 char *zfgets(char *line, int size, zfp *zf);
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    48 int zfputs(char *line, zfp *zf);
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    49 zfp *zfopen(const char *path, const char *mode);
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    50 int zfclose(zfp *zf);
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    51 int zfpeek(zfp *zf);
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    52 int zfeof(zfp *zf);
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    53 
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    54 #endif /* _ZFIO_H_ */
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