Mercurial > repos > youngkim > ezbamqc
view ezBAMQC/test-data/output/data/smp2.res.txt @ 17:161866cee2a2
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| author | youngkim |
|---|---|
| date | Wed, 30 Mar 2016 13:28:47 -0400 |
| parents | dfa3745e5fd8 |
| children |
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filename /sonas-hs/bsr/hpc/data/yjin/test_BAMqc/exp/test1/data/smp2.res.txt is_pairEnd 0 clipping_plot_file /sonas-hs/bsr/hpc/data/yjin/test_BAMqc/exp/test1/figs/smp2.clipping_profile.png mapq_plot_file /sonas-hs/bsr/hpc/data/yjin/test_BAMqc/exp/test1/figs/smp2.mapq_profile.png mapq_file /sonas-hs/bsr/hpc/data/yjin/test_BAMqc/exp/test1/data/smp2.mapq_profile.xls read_cov_plot_file /sonas-hs/bsr/hpc/data/yjin/test_BAMqc/exp/test1/figs/smp2.geneBodyCoverage.png trans_cov_plot_file /sonas-hs/bsr/hpc/data/yjin/test_BAMqc/exp/test1/figs/smp2.TransCoverage.png insert_plot_file /sonas-hs/bsr/hpc/data/yjin/test_BAMqc/exp/test1/figs/smp2.inner_distance_plot.png insert_file /sonas-hs/bsr/hpc/data/yjin/test_BAMqc/exp/test1/data/smp2.inner_distance_freq.txt read_dist_plot_file1 /sonas-hs/bsr/hpc/data/yjin/test_BAMqc/exp/test1/figs/smp2.read_distr.png read_dist_plot_file2 /sonas-hs/bsr/hpc/data/yjin/test_BAMqc/exp/test1/figs/smp2.read_distr_pie.png readLen_plot_file /sonas-hs/bsr/hpc/data/yjin/test_BAMqc/exp/test1/figs/smp2.readlen_profile.png geneCount_file /sonas-hs/bsr/hpc/data/yjin/test_BAMqc/exp/test1/data/smp2.geneAbundance.txt seqDeDup_percent 0.000000 posDeDup_percent 0.000000 no_clipping 0 no_rRNA 0 total_reads 80603 uniq_mapped_reads 69389 multi_mapped_reads 11214 unmapped_reads 0 low_qual 0 low_qual_read1 0 low_qual_read2 0 pcr_dup 0 rRNA_read 5939 cds_read 22143 utr5_read 1293 utr3_read 15499 intron_read 7798 itgup1k_read 156 itgdn1k_read 511 itg_read 21398 unmapped_read1 0 unmapped_read2 0 mapped_read1 0 mapped_read2 0 forward_read 34065 reverse_read 35324 paired_reads 0 mapped_plus_minus 0 mapped_plus_plus 0 mapped_minus_plus 0 mapped_minus_minus 0 ins_read 0 del_read 0 noSplice 56765 splice 12624 paired_diff_chrom 0