Mercurial > repos > yufei-luo > differential_expression_analysis_pipeline_for_rnaseq_data
diff DiffExpAnal/listInputs.xml @ 0:63799b789162 draft
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| author | yufei-luo |
|---|---|
| date | Tue, 22 Jan 2013 10:07:03 -0500 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/DiffExpAnal/listInputs.xml Tue Jan 22 10:07:03 2013 -0500 @@ -0,0 +1,25 @@ +<tool id="listInputs" name="listInputs"> + <description>Give a list of input files from different conditions/groups for DESeq analysis, DESeq can then charge these input files from the given list.</description> + <command interpreter="perl"> listInputs.pl $inputFromGroup1 $inputFromGroup2 $output + </command> + + <inputs> + <param name="inputFromGroup1" type="data" format="tabular" label="Please choose your file from group1."/> + <param name="inputFromGroup2" type="data" format="tabular" label="Please choose your file from group2."/> + </inputs> + + <outputs> + <data format="txt" name="output" label="listInputs Output"/> + </outputs> + + <help> + This tool can facilate the the chargement for DESeq tool. + Example: + From group1, we have input1. + From group2, we have input2. + This tool will give us a list like: + fileID=1 input1 group1 + fileID=2 input2 group2 + Where the value of fileID is unique for each input file. + </help> +</tool>