Mercurial > repos > yufei-luo > differential_expression_analysis_pipeline_for_rnaseq_data
directory /DiffExpAnal/DESeqTools/ @ 0:63799b789162 draft
| name | size | permissions | 
|---|---|---|
| [up] | drwxr-xr-x | |
  raw/
 | 
drwxr-xr-x | |
  HTseqClean.R
 | 
445 | -rwxr-xr-x | 
  MAplotDE.R
 | 
437 | -rwxr-xr-x | 
  RNAseqFunctions.R
 | 
1888 | -rwxr-xr-x | 
  anadiffGenes2conds.R
 | 
7768 | -rwxr-xr-x | 
  barplotNul.R
 | 
630 | -rwxr-xr-x | 
  barplotTC.R
 | 
616 | -rwxr-xr-x | 
  boxplotCounts.R
 | 
615 | -rwxr-xr-x | 
  clusterPlot.R
 | 
686 | -rwxr-xr-x | 
  densityPlot.R
 | 
702 | -rwxr-xr-x | 
  exportComplete.R
 | 
654 | -rwxr-xr-x | 
  exportDiff.R
 | 
1044 | -rwxr-xr-x | 
  histoRawp.R
 | 
369 | -rwxr-xr-x | 
  loadCountData.R
 | 
1086 | -rwxr-xr-x | 
  loadTargetFile.R
 | 
351 | -rwxr-xr-x | 
  majSequence.R
 | 
944 | -rwxr-xr-x | 
  pairwiseSERE.R
 | 
1239 | -rwxr-xr-x | 
  pairwiseScatterPlots.R
 | 
898 | -rwxr-xr-x | 
  plotDispEstimates.R
 | 
627 | -rwxr-xr-x | 
  raw2counts.R
 | 
426 | -rwxr-xr-x | 
  removeNul.R
 | 
268 | -rwxr-xr-x | 

 raw/
 HTseqClean.R