# HG changeset patch
# User yufei-luo
# Date 1358868695 18000
# Node ID b8887c180d4575f08565a66cebd838ec42e01b6b
# Parent  63799b7891624bb37182db4e252c18244cc04faf
Uploaded

diff -r 63799b789162 -r b8887c180d45 DiffExpAnal/tophat_parallel.xml
--- a/DiffExpAnal/tophat_parallel.xml	Tue Jan 22 10:07:03 2013 -0500
+++ b/DiffExpAnal/tophat_parallel.xml	Tue Jan 22 10:31:35 2013 -0500
@@ -17,8 +17,6 @@
             ## Handle reference file.
             #if $refGenomeSource.genomeSource == "history":
                 --own-file=$refGenomeSource.ownFile
-            #else:
-                --indexes-path="${ filter( lambda x: str( x[0] ) == str( $refGenomeSource.index ), $__app__.tool_data_tables[ 'tophat_indexes' ].get_fields() )[0][-1] }"
             #end if
 
             ## Are reads single-end or paired?