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annotate SMART/galaxy/qualToFastq.xml @ 32:3441fe98a2ba

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author m-zytnicki
date Tue, 30 Apr 2013 14:34:10 -0400
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1 <tool id="qualToFastq" name="qual -> Fastq">
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2 <description>Convert a file in FASTA/Qual format to FastQ format.</description>
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3 <command interpreter="python"> ../Java/Python/qualToFastq.py -f $inputFastaFile -q $inputQualFile -o $outputFile </command>
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4 <inputs>
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5 <param name="inputFastaFile" type="data" label="Input fasta File" format="fasta"/>
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6 <param name="inputQualFile" type="data" label="Input qual File" format="txt"/>
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7 </inputs>
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8
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9 <outputs>
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10 <data format="fastq" name="outputFile" label="[qual -> Fastq] Output File"/>
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11 </outputs>
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12
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13 <help>
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14 </help>
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15 </tool>