Mercurial > repos > yufei-luo > s_mart
comparison SMART/Java/Python/genome.fasta @ 31:0ab839023fe4
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| author | m-zytnicki |
|---|---|
| date | Tue, 30 Apr 2013 14:33:21 -0400 |
| parents | |
| children |
comparison
equal
deleted
inserted
replaced
| 30:5677346472b5 | 31:0ab839023fe4 |
|---|---|
| 1 >chr1 | |
| 2 GTAATCAACTACCAATTCCAGCTCTCTTTTGACAACTGGTCTTATACCCACTTCCGTACACTTGCAACCC | |
| 3 TCGTAAGACAATTGCAAATGAGTAATGGCCTTCCAATTAGCATTGGACGCCCTTGCACCCACGACTCACA | |
| 4 GAGATCCCTCTCTGCACCCGATTCTCGAATCCACAGTGGATTCAATTCGCTCCTCGATACAGACCTACCC | |
| 5 ATGGTCCATTCCGAAGGAACTTCTACCCCTACTCAACTCCTACGGCATCCCAACATCTGGTTTGGGAACC | |
| 6 TCCCACCACCCCCACGCCGCCCACAAGACAATCGAGACTTTTCTCCTTTGCACCCACTGGTCTTTCCAGG | |
| 7 CCACCACTCCCAGCTCCGTCATGTTCATGAAACCCAGCAAGTTCAACAAACTTGCCCAGGTAAACTCAAA | |
| 8 CTTTCGGGAGCTGAAGAACTACCGCCTGCACCCCAACGACAGCACTCGTTACCCCTTCACATCACCAGAC | |
| 9 CTTCCCGTTTTCCCCACCATTTTCATGCACGACGCCCTGATGTATTACCATCCGTCCCAGATCATGGACC | |
| 10 TGTTCTTRCGGAAACCAAACCTCGAACGTCTGTACGCCAGCCTCGTAGTGCCACCCGAGGCCCATCTTTC | |
| 11 CGACCAATCCTTCTACCCAAAGTTGTACACGTACACGACGACCCGCCACACTCTTCACTACGTCCCAGAG | |
| 12 GGTCACGAAGCCGGCAGCTACAACCAACCGTCCGACGCCCACTCTTGGCTCCGAATCAATTCCATTCGCC | |
| 13 TCGGCAACCACCACCTCTCAGTGACGATCCTGGAATCCTGGGGCCCCGTCCACTCGCTCCTCATTCAACG | |
| 14 AGGGACCCCCCCCCCCGACCCATCACTCCAGGCCCCTCCAACACTCATGRCCTCAGACCTCTTTCGGTCT | |
| 15 TACCAAGARCCTCGCCTCGACGTGGTCTCCTTCCGAATCCCCGACGCCATCGAACTTCCACAGGCCACAT | |
| 16 TCCTCCAACAACCACTTCGAGACCGACTGGTCCCCCGAGCCGTCTACAACGCCCTGTTCACCTATACCAG | |
| 17 AGCAGTCCGCACACTCCGAACTTCAGACCCAGCAGCATTCGTAAGGATGCACTCCTCCAAACCGGACCAC | |
| 18 GATTGGGTCACCTCGAACGCCTGGGACAACCTGCAAACCTTCGCACTTCTGAACGTTCCCCTCCGACCAA | |
| 19 ACGTCGTCTACCACGTTCTTCAGAGCCCAATCGCCTCCCTAAGCCTTTACCTGAGGCAACATTGGCGCCG | |
| 20 TCTTACCGCCACCGCCGTCCCTATCCTCTCCTTCCTAACCCTCCTGCAGCGCTTCCTTCCATTGCCTATA | |
| 21 CCTCTAGCAGAGGTAAAATCCATCACAGCCTTCCGAAGGGAGCTTTACCGAAAGAAGGAGCCCCACCACC | |
| 22 CCCTCGACGTCTTCCATCTCCAGCACCGCGTCCGCAACTACCACTCCGCGATCTCGGCCGTACGCCCGGC | |
| 23 TTCCCCACCCCACCAAAAACTCCCACACGCACTCCAGAAAGCCGCATTACTGCTTCTCCGACCGATATCG | |
| 24 CCCCTCTTGACAGCGACCCCGTTCTTTCGGTCCGAACAGAAGTCCATGCTCCCGAACGCCGAACTTTCAT | |
| 25 GGACCCTGAAGCGCTTCGCTCTGCCCTGGCAAGCCTCCCTAGTCCTCCTCGCTCTGTCGGAATCATCCAT | |
| 26 ACTGCTCCACAAACTGTTCTCCCCGCCAACCCTCCAAGCCCAACACGACACCTACCACCGACATCTCCAC | |
| 27 CCTGGATCCTACAGTCTCCAGTGGGAGAGGACGCCATTGTCGATTCCGAGGACGACAGCATTTCTTCCTT | |
| 28 TCACTCCCACGACTTCGACAGCCCCTCCGGACCGCTCCGAAGCCAGTCTCCCTCCCGCTTTCGCCTCCAC | |
| 29 CTTCGTTCCCCGTCCACCTCCAGCGGCATCGAGCCCTGGAGCCCAGCCTCCTACGACTACGGCAGCGCCC | |
| 30 CCGACACCGATTGAACCCACCCAACGCACCCATCAAAATTCTGACCTCGCGCTCGAAAGTTCAACCTCAA | |
| 31 CCGAACCTCCCCCACCCCCCATCCGATCCCCCGACAYGACGCCCTCCGCCCCCGTCCTTTTCCCAGAAAT | |
| 32 CAACTCACCTCGTCGTTTTCCCCCCCAACTTCCCGCCACGCCCGATCTCGAACCCGCCCACACTCCACCC | |
| 33 CCTCTTTCCATCCCGCACCAAGATCCGACTGACTCAGCGGACCCCCTCATGGGCTCCCACCTTTTGCACC | |
| 34 ATTCACTGCCTGCACCCCCCACCCACCCCCTTCCATCTTCACAGCTGTTACCCGCACCTTTAACGAACGA | |
| 35 CCCCACTGCGATCGGCCCGGTGCTCCCCTTTGAAGAACTCCACCCACGCAGGTACCCTGAAAACACCGCC | |
| 36 ACTTTCCTCACGAGGCTCCGTTCACTCCCATCAAACCATCTTCCACAACCCACCTTGAATTGTCTTCTCT | |
| 37 CCGCTGTCTCCGACCAAACCAAGGTTTCCGAGGAGCACCTCTGGGAGTCCCTACAGACAATTCTCCCAGA | |
| 38 CAGCCAACTCAGCAATGAAGAGACCAACACTCTCGGGCTTTCAACTGAACACCTCACTGCGTTGGCCCAC | |
| 39 CTTTACAACTTCCAGGCAACCGTTTACTCCGATCGCGGCCCCATCCTCTTCGGCCCCTCCGACACCATCA | |
| 40 AGAGGATAGACATCACCCACACCACCGGACCGCCATCCCACTTTTCACCCGGCAAAAGACTCCTAGGCAG | |
| 41 CCAACCCTCCGCTAAGGGCCATCCCTCCGACCCACTCATCAGAGCCATGAAGTCTTTCAAAGTATCCGGC | |
| 42 AACTACCTTCCCTTCTCTGAGGCCCACAACCATCCCACCTCCATCTCACACGCCAAGAACTTGATTTCAA | |
| 43 ACATGAAGAATGGTTTCGACGGCGTCCTCTCCCTCCTCGACGTCTCCACGGGCCAACGAACCGGACCCRC | |
| 44 CCCCAAAGAACGGATCATCCAGATAGACCACTACCTTGACACCAACCCCGGCAAAACCACTCCTGTGGTG | |
| 45 CATTTCGCTGGCTTCGCTGGCTGTGGGAAGACATATCCGATCCAACAGCTCCTCAAAACCAAACTGTTCA | |
| 46 AAGACTTCCGGGTCTCTTGCCCTACCACAGAACTCAGAACCGAATGGAAGACAGCGATGGAACTCCACGG | |
| 47 CTCCCAGTCATGGCGCTTTAACACTTGGGAGTCTTCCATTCTCAAGTCATCCAGAATCCTGGTCATTGAT | |
| 48 GAGATCTACAAAATGCCAAGAGGGTACCTCGACCTTTCCATCCTCGCCGACCCCGCCCTCGAGCTCGTCA | |
| 49 TAATTCTCGGCGATCCTCTMCAGGGCGAGTACCACTCCCAATCGAAAGACTCATCCAACCACCGCCTTCC | |
| 50 CTCTGAAACTCTCAGGCTGCTACCATACATCGACATGTACTGCTGGTGGAGTTACCGCATTCCTCAATGC | |
| 51 ATCGCCCGACTCTTCCAAATTCACAGCTTCAATGCCTGGCAAGGAGTTATCGGGTCCGTTTCCACTCCCC | |
| 52 ATGATCAATCCCCCGTCCTCACCAACAGTCATGCCTCATCTCTTACCTTCAACAGCCTGGGATATCGCTC | |
| 53 CTGCACGATCAGCTCTAGCCAAGGCCTCACATTCTGCGACCCCGCCATAATCGTCCTGGACAACTACACC | |
| 54 AAGTGGCTCTCCTCGGCTAACGGCCTCGTCGCCCTCACTCGATCCAGATCAGGCGTCCAATTCATGKGCC | |
| 55 CCTCTTCCTACGTCGGGGGAACCAACGGCTCTTCCGCCATGTTTTCCGACGCCTTCAACAACAGCCTCAT | |
| 56 CATCATGGATCGCTACTTCCCATCCCTGTTCCCGCAACTCAAGCTCATCACCTCCCCCCTCACAACTCGC | |
| 57 GGCCCCAAACTCAACGGGGCCACCCCCAGCGCATCCCCCACCCACCGTTCGCCAAACTTCCACCTTCCCC | |
| 58 CACACATTCCGCTCTCCTATGATCGTGATTTTGTTACGGTGAACCCAACTCTCCCCGACCAAGGACCCGA | |
| 59 AACAAGACTCGACACCCACTTTCTCCCACCGTCTCGGCTCCCTCTCCATTTCGATCTCCCACCGGCTATC | |
| 60 ACCCCACCCCCGGTTTCCACAAGCGTCGACCCGCCACAAGCGAAAGCTAGCCCCGTCTACCCAGGCGAGT | |
| 61 TCTTCGATTCTCTGGCGGCGTTCTTCTTACCAGCACACGACCCATCAACAAGGGAAATACTCCACAAAGA | |
| 62 TCAATCTAGCAACCAGTTCCCCTGGTTCGACCGACCCTTCAGCCTGTCCTGCCAGCCCTCAAGTCTGATT | |
| 63 TCCGCCAAGCATGCACCCAACCATGATCCGACCCTTCTACCGGCCTCCATCAACAAACGCTTGCGATTCA | |
| 64 GACCCAGTGACTCACCGCACCAAATCACCGCGGACGACGTGGTCCTAGGCCTGCAACTCTTTCACTCTCT | |
| 65 TTGTCGCGCCTACTCACGTCAACCCAACAGCACCGTTCCATTCAACCCTGAACTTTTCGCAGAATGCATC | |
| 66 TCTCTGAATGAGTACGCACAGCTCAGTTCCAAAACCCAATCCACCATAGTGGCCAACGCTTCACGCTCCG | |
| 67 ACCCAGACTGGCGACACACCACCGTCAAGATCTTCGCGAAAGCCCAACACAAAGTCAACGACGGCTCCAT | |
| 68 CTTCGGCTCGTGGAAAGCCTGCCAGACCCTCGCACTCATGCACGACTACGTGATTCTGGTTCTTGGACCC | |
| 69 GTCAAGAAATACCAGAGAATCTTCGACAACGCTGACCGGCCACCTAACATCTACTCACACTGCGGCAAGA | |
| 70 CACCCAACCAACTTCGAGATTGGTGCCAGGAACATCTCACTCATTCCACCCCCAAAATCGCAAACGACTA | |
| 71 CACCGCTTTCGACCAGTCCCAGCATGGAGAATCCGTGGTCCTTGAAGCCCTCAAAATGAAGAGACTGAAC | |
| 72 ATTCCRAGCCATCTGATTCAGCTCCACGTCCACCTCAAGACCAACGTCTCCACCCAGTTCGGCCCCCTCA | |
| 73 CATGCATGCGCCTAACCGGGGAACCCGGAACTTACGACGACAACACTGACTATAACCTCGCAGTCATCTA | |
| 74 CTCCCAGTATGACGTCGGTTCCTGCCCCATCATGGTTTCTGGCGACGACTCACTCATAGACCACCCCCTT | |
| 75 CCCACTCGCCACGACTGGCCATCCGTTCTCAAACGCCTCCACCTCCGCTTCAAACTTGAACTCACCTCTC | |
| 76 ACCCCCTCTTCTGTGGCTACTACGTCGGTCCAGCCGGCTGCATCCGCAACCCCCTGGCCCTTTTCTGCAA | |
| 77 GCTCATGATCGCCGTGGACGACGACGCCCTCGACGACCGACGACTCAGCTACCTCACCGAGTTCACCACC | |
| 78 GGACACCTCCTTGGCGAATCACTGTGGCACCTCCTCCCTGAAACCCATGTTCAGTATCAGTCAGCCTGCT | |
| 79 TTGACTTCTTCTGCAGGCGGTGCCCAAGACACGAGAAAATGCTCCTCGACGACTCCACACCCGCACTCAG | |
| 80 CCTCCTCGAACGAATCACTTCTTCGCCGAGGTGGCTCACCAAAAATGCCATGTACCTCCTCCCTGCCAAG | |
| 81 CTACGACTGGCCATCACCTCTCTATCTCAAACGCAGTCCTTCCCAGAATCCATCGAGGTTTCCCACGCTG | |
| 82 AGTCTGAATTGCTTCACTACGTCCAATAGCAATCAGCCCCAACATGGAAATCGACAAAGAACTCGCCCCC | |
| 83 CAAGACCGCACCGTCACCGTCGCCACCGTCCTACCAGCTGTCCCCGGCCCATCACCTCTCACCATCAAAC | |
| 84 AACCGTTYCAGTCTGAAGTTCTATTTGCTGGAACCAAAGATGCCGAGGCTTCTCTCACCATCGCCAACAT | |
| 85 CGACAGCGTTTCCACCCTCACCACCTTCTACCGTCATGCATCTCTGGAATCACTCTGGGTCACTATCCAT | |
| 86 CCCACCTTGCAAGCCCCAGCTTTCCCGACCACGGTCGGTGTCTGCTGGGTACCCGCCAATTCTCCAGTCA | |
| 87 CTCCCGCCCAAATCACCAAGACCTATGGTGGCCAGATCTTCTGCATTGGCGGCGCCATCAACACCCTCTC | |
| 88 ACCTCTCATCGTCAAGTGCCCACTTGAAATGATGAACCCCCGGGTCAAGGATTCGATTCAGTACCTTGAC | |
| 89 TCGCCCAAACTCCTCATCTCCATCACCGCTCAACCCACCGCTCCCCCCGCATCGACCTGCATAATAACTG | |
| 90 TATCAGGAACTCTCTCGATGCACTCTCCGCTCATCACGGACACTTCCACCTAAGTTCTCGATCTTTAAAA | |
| 91 TCGTTAGCTCGCCAGTTAGCGAGGTCTGTCCCCACACGACAGATAATCGGGTGCAACTCCCGCCCCTCTT | |
| 92 CCGAGGGTCATCGGAACC |