Mercurial > repos > yufei-luo > s_mart
comparison commons/launcher/tests/MockOutputForBlat.py @ 31:0ab839023fe4
Uploaded
| author | m-zytnicki |
|---|---|
| date | Tue, 30 Apr 2013 14:33:21 -0400 |
| parents | 94ab73e8a190 |
| children |
comparison
equal
deleted
inserted
replaced
| 30:5677346472b5 | 31:0ab839023fe4 |
|---|---|
| 1 class MockOutputForBlat(object): | |
| 2 | |
| 3 def write(self, inFileName): | |
| 4 f = open(inFileName, 'w') | |
| 5 f.write('gi|226792305|gb|GO545799.1|GO545799 290 551 Vein_ctg_10639 674 935 1.0e-130 463.0 93.51\n') | |
| 6 f.write('gi|226792305|gb|GO545799.1|GO545799 138 283 Vein_ctg_10639 519 664 1.0e-50 198.0 82.88\n') | |
| 7 f.write('gi|226792305|gb|GO545799.1|GO545799 577 686 Vein_ctg_10639 961 1070 1.4e-46 184.0 90.91\n') | |
| 8 f.write('gi|226792305|gb|GO545799.1|GO545799 566 572 Vein_ctg_10639 944 950 3.1e+05 13.0 100.00\n') | |
| 9 f.write('gi|226792293|gb|GO546055.1|GO546055 107 193 Vein_ctg_10638 87 1 2.2e-42 170.0 100.00\n') | |
| 10 f.write('gi|226792293|gb|GO546055.1|GO546055 34 91 Vein_ctg_10638 161 104 2.5e-22 103.0 94.83\n') | |
| 11 f.write('gi|226792293|gb|GO546055.1|GO546055 521 611 Vein_ctg_10639 1075 985 2.9e-38 156.0 92.31\n') | |
| 12 f.write('gi|226790810|gb|GO546215.1|GO546215 57 520 Vein_ctg_5197 1862 1399 8.7e-128 454.0 72.84\n') | |
| 13 f.write('gi|226790791|gb|GO546209.1|GO546209 135 199 Vein_ctg_5197 1994 1930 7.4e-25 112.0 93.85\n') | |
| 14 f.write('gi|226790791|gb|GO546209.1|GO546209 36 82 Vein_ctg_5197 2126 2080 1.9e-06 50.0 76.60\n') | |
| 15 f.write('gi|226790483|gb|GO545656.1|GO545656 280 541 Vein_ctg_10639 674 935 1.0e-130 463.0 93.51\n') | |
| 16 f.write('gi|226790483|gb|GO545656.1|GO545656 128 273 Vein_ctg_10639 519 664 1.0e-50 198.0 82.88\n') | |
| 17 f.write('gi|226790483|gb|GO545656.1|GO545656 567 640 Vein_ctg_10639 961 1034 1.1e-25 114.0 87.84\n') | |
| 18 f.write('gi|226790483|gb|GO545656.1|GO545656 556 562 Vein_ctg_10639 944 950 3.1e+05 13.0 100.00\n') | |
| 19 f.write('gi|226790458|gb|GO545644.1|GO545644 1 95 Vein_ctg_10638 1369 1275 3.5e-40 163.0 92.63\n') | |
| 20 f.write('gi|226790458|gb|GO545644.1|GO545644 146 185 Vein_ctg_10638 1225 1186 3.7e-07 53.0 82.50\n') | |
| 21 f.write('gi|226790049|gb|GO546186.1|GO546186 177 263 Vein_ctg_10638 87 1 5.6e-39 159.0 96.55\n') | |
| 22 f.write('gi|226790049|gb|GO546186.1|GO546186 106 161 Vein_ctg_10638 159 104 3.8e-21 99.0 94.64\n') | |
| 23 f.write('gi|226790011|gb|GO546174.1|GO546174 138 283 Vein_ctg_10639 519 664 1.0e-50 198.0 82.88\n') | |
| 24 f.write('gi|226789634|gb|GO545875.1|GO545875 135 306 Vein_ctg_10638 1446 1275 7.3e-80 294.0 91.86\n') | |
| 25 f.write('gi|226789634|gb|GO545875.1|GO545875 451 496 Vein_ctg_10638 1132 1087 1.8e-18 90.0 100.00\n') | |
| 26 f.write('gi|226789634|gb|GO545875.1|GO545875 357 393 Vein_ctg_10638 1225 1189 1.8e-05 47.0 81.08\n') | |
| 27 f.write('gi|226789597|gb|GO546106.1|GO546106 432 537 Vein_ctg_2286 1166 1061 5.0e-40 162.0 86.79\n') | |
| 28 f.write('gi|226789597|gb|GO546106.1|GO546106 538 632 Vein_ctg_2286 1008 914 6.0e-33 139.0 85.26\n') | |
| 29 f.write('gi|226789571|gb|GO546096.1|GO546096 353 474 Vein_ctg_5197 2426 2305 4.1e-46 182.0 84.43\n') | |
| 30 f.write('gi|226789566|gb|GO545840.1|GO545840 73 232 Vein_ctg_10639 776 935 2.5e-75 279.0 92.50\n') | |
| 31 f.write('gi|226789566|gb|GO545840.1|GO545840 258 372 Vein_ctg_10639 961 1075 4.2e-50 196.0 92.17\n') | |
| 32 f.write('gi|226789566|gb|GO545840.1|GO545840 247 253 Vein_ctg_10639 944 950 3.1e+05 13.0 100.00\n') | |
| 33 f.close() |