comparison SMART/galaxy/restrictSequenceList.xml @ 6:769e306b7933

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author yufei-luo
date Fri, 18 Jan 2013 04:54:14 -0500
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5:ea3082881bf8 6:769e306b7933
1 <tool id="restrictSequenceList" name="restrict sequence list">
2 <description>Keep the elements of a list of sequences whose name is mentionned in a given file.</description>
3 <command interpreter="python"> ../Java/Python/restrictSequenceList.py -i $inputFile -f fasta -n $name -o $outputFile </command>
4
5 <inputs>
6 <param name="inputFile" type="data" label="Input fasta File" format="fasta"/>
7 <param name="name" type="data" label="The txt file contains the names of the transcripts." format="txt"/>
8 </inputs>
9
10 <outputs>
11 <data format="fasta" name="outputFile" label="[restrictSequenceList] Output File"/>
12 </outputs>
13
14 <help>
15 </help>
16 </tool>