Mercurial > repos > yufei-luo > s_mart
comparison SMART/galaxy/Clusterize.xml @ 18:94ab73e8a190
Uploaded
author | m-zytnicki |
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date | Mon, 29 Apr 2013 03:20:15 -0400 |
parents | 440ceca58672 |
children | 0ab839023fe4 |
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17:b0e8584489e6 | 18:94ab73e8a190 |
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1 <tool id="MergingDataClusterize" name="clusterize"> | 1 <tool id="MergingDataClusterize" name="clusterize"> |
2 <description>Clusterize features when their genomic intervals overlap.</description> | 2 <description>Clusterize features when their genomic intervals overlap.</description> |
3 <requirements> | |
4 <requirement type="set_environment">PYTHONPATH</requirement> | |
5 </requirements> | |
3 <command interpreter="python"> | 6 <command interpreter="python"> |
4 ../Java/Python/clusterize.py -i $formatType.inputFileName | 7 ../Java/Python/clusterize.py -i $formatType.inputFileName |
5 #if $formatType.FormatInputFileName == 'bed': | 8 #if $formatType.FormatInputFileName == 'bed': |
6 -f bed | 9 -f bed |
7 #elif $formatType.FormatInputFileName == 'gff': | 10 #elif $formatType.FormatInputFileName == 'gff': |