Mercurial > repos > yufei-luo > s_mart

diff SMART/galaxy/CountReadGCPercent.xml @ 31:0ab839023fe4

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Uploaded
author m-zytnicki
date Tue, 30 Apr 2013 14:33:21 -0400
parents 94ab73e8a190
children
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--- a/SMART/galaxy/CountReadGCPercent.xml	Mon Apr 29 03:45:52 2013 -0400
+++ b/SMART/galaxy/CountReadGCPercent.xml	Tue Apr 30 14:33:21 2013 -0400
@@ -1,8 +1,5 @@
-<tool id="CountReadGCPercent" name="count read GC percent">
+<tool id="CountReadGCPercent" name="count read GCpercent">
     <description>Count GC percent for each read against a genome.</description>
-	<requirements>
-		<requirement type="set_environment">PYTHONPATH</requirement>
-	</requirements>
     <command interpreter="python"> ../Java/Python/CountReadGCPercent.py -i $inputFastaFile -j $inputGffFile -o $outputFile</command>
   <inputs>
       <param name="inputFastaFile" type="data" label="Input reference fasta File" format="fasta"/>
@@ -10,11 +7,10 @@
   </inputs>
 
   <outputs>
-    <data format="gff3" name="outputFile" label="[count read GC percent] Output File"/>
+    <data format="gff3" name="outputFile" label="[CountReadGCPercent] Output File"/>
    </outputs>
 
   <help>
-Count the GC% of a FASTA file.
   </help>
 </tool>