diff commons/core/launcher/JobScriptTemplate.py @ 6:769e306b7933

Change the repository level.

--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/commons/core/launcher/JobScriptTemplate.py	Fri Jan 18 04:54:14 2013 -0500
@@ -0,0 +1,95 @@
+#!/usr/bin/env python
+
+import os
+import sys
+import time
+import shutil
+from commons.core.checker.RepetException import RepetException
+from commons.core.sql.TableJobAdaptator import TableJobAdaptator
+from commons.core.sql.DbFactory import DbFactory
+from commons.core.sql.Job import Job
+
+try:
+	newDir = None
+	print os.uname()
+	beginTime = time.time()
+	print 'beginTime=%f' % beginTime
+	print "work in dir '@@tmpDir@@'"
+	sys.stdout.flush()
+	if not os.path.exists( "@@tmpDir@@" ):
+		raise IOError("ERROR: temporary directory '@@tmpDir@@' doesn't exist")
+	
+	minFreeGigaInTmpDir = 1
+	freeSpace = os.statvfs("@@tmpDir@@")
+	if ((freeSpace.f_bavail * freeSpace.f_frsize) / 1073741824.0 < minFreeGigaInTmpDir):
+		raise RepetException("ERROR: less than %iG of input file in '@@tmpDir@@'" % minFreeGigaInTmpDir)
+	
+	os.chdir("@@tmpDir@@")
+	newDir = "@@groupId@@_@@jobName@@_@@time@@"
+	if os.path.exists(newDir):
+		shutil.rmtree(newDir)
+	os.mkdir(newDir)
+	os.chdir(newDir)
+	
+	iJob = Job(jobname = "@@jobName@@", groupid = "@@groupId@@", launcherFile = "@@launcher@@", node = os.getenv("HOSTNAME"))
+	iDb = DbFactory.createInstance()
+	iTJA = TableJobAdaptator(iDb, "@@jobTableName@@")
+	print "current status: %s" % iTJA.getJobStatus(iJob)
+	iTJA.changeJobStatus(iJob, "running")
+	print "updated status: %s" % iTJA.getJobStatus(iJob)
+	sys.stdout.flush()
+	iDb.close()
+	
+	@@cmdStart@@
+	if log != 0:
+		raise RepetException("ERROR: job returned %i" % log)
+	else:
+		print "job finished successfully"
+	sys.stdout.flush()
+	@@cmdFinish@@
+	
+	os.chdir("..")
+	shutil.rmtree(newDir)
+	
+	iDb = DbFactory.createInstance()
+	iTJA = TableJobAdaptator(iDb, "@@jobTableName@@")
+	print "current status: %s" % iTJA.getJobStatus(iJob)
+	iTJA.changeJobStatus(iJob, "finished")
+	print "updated status: %s" % iTJA.getJobStatus(iJob)
+	sys.stdout.flush()
+	iDb.close()
+	
+	endTime = time.time()
+	print 'endTime=%f' % endTime
+	print 'executionTime=%f' % (endTime - beginTime)
+	print os.uname()
+	sys.stdout.flush()
+
+except IOError, e :
+	print e
+	iJob = Job(jobname = "@@jobName@@", groupid = "@@groupId@@", launcherFile = "@@launcher@@", node = os.getenv("HOSTNAME"))
+	iDb = DbFactory.createInstance()
+	iTJA = TableJobAdaptator(iDb, "@@jobTableName@@")
+	print "current status: %s" % iTJA.getJobStatus(iJob)
+	iTJA.changeJobStatus(iJob, "error")
+	print "updated status: %s" % iTJA.getJobStatus(iJob)
+	sys.stdout.flush()
+	iDb.close()
+	sys.exit(1)
+
+except Exception, e :
+	print "tmpDir is : @@tmpDir@@"
+	print "cDir is : @@cDir@@"
+	print e
+	if newDir != None and os.path.exists("../%s" % newDir) and not os.path.exists("@@cDir@@/%s" % newDir):
+		os.chdir("..")
+		shutil.move(newDir, "@@cDir@@/%s" % newDir)
+	iJob = Job(jobname = "@@jobName@@", groupid = "@@groupId@@", launcherFile = "@@launcher@@", node = os.getenv("HOSTNAME"))
+	iDb = DbFactory.createInstance()
+	iTJA = TableJobAdaptator(iDb, "@@jobTableName@@")
+	print "current status: %s" % iTJA.getJobStatus(iJob)
+	iTJA.changeJobStatus(iJob, "error")
+	print "updated status: %s" % iTJA.getJobStatus(iJob)
+	sys.stdout.flush()
+	iDb.close()
+	sys.exit(1)