Mercurial > repos > yufei-luo > s_mart
diff smart_toolShed/commons/core/checker/test/Test_OldConfigChecker.py @ 0:e0f8dcca02ed
Uploaded S-MART tool. A toolbox manages RNA-Seq and ChIP-Seq data.
author | yufei-luo |
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date | Thu, 17 Jan 2013 10:52:14 -0500 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/smart_toolShed/commons/core/checker/test/Test_OldConfigChecker.py Thu Jan 17 10:52:14 2013 -0500 @@ -0,0 +1,104 @@ +# Copyright INRA (Institut National de la Recherche Agronomique) +# http://www.inra.fr +# http://urgi.versailles.inra.fr +# +# This software is governed by the CeCILL license under French law and +# abiding by the rules of distribution of free software. You can use, +# modify and/ or redistribute the software under the terms of the CeCILL +# license as circulated by CEA, CNRS and INRIA at the following URL +# "http://www.cecill.info". +# +# As a counterpart to the access to the source code and rights to copy, +# modify and redistribute granted by the license, users are provided only +# with a limited warranty and the software's author, the holder of the +# economic rights, and the successive licensors have only limited +# liability. +# +# In this respect, the user's attention is drawn to the risks associated +# with loading, using, modifying and/or developing or reproducing the +# software by the user in light of its specific status of free software, +# that may mean that it is complicated to manipulate, and that also +# therefore means that it is reserved for developers and experienced +# professionals having in-depth computer knowledge. Users are therefore +# encouraged to load and test the software's suitability as regards their +# requirements in conditions enabling the security of their systems and/or +# data to be ensured and, more generally, to use and operate it in the +# same conditions as regards security. +# +# The fact that you are presently reading this means that you have had +# knowledge of the CeCILL license and that you accept its terms. + + +import unittest +import os +from commons.core.checker.OldConfigChecker import ConfigChecker +from commons.core.checker.ConfigException import ConfigException + +class Test_ConfigChecker( unittest.TestCase ): + + def setUp(self): + pass + + def tearDown(self): + pass + + + def testFileNotFound(self): + exceptionExpected = None + configChecker = ConfigChecker("",{}) + try : + configChecker.check("noExistsFile.cfg") + except ConfigException, ce: + exceptionExpected = ce + + self.assertTrue(exceptionExpected != None) + msg = exceptionExpected.messages[0] + self.assertTrue(msg.startswith("CONFIG FILE not found - ")) + + + def testNoSectionInConfigFile (self): + exceptionExpected = None + dummyFile = open("dummyFile.cfg", "w") + configChecker = ConfigChecker("dummySection",{}) + try : + configChecker.check("dummyFile.cfg") + except ConfigException, ce: + exceptionExpected = ce + + self.assertTrue(exceptionExpected != None) + msg = exceptionExpected.messages[0] + self.assertTrue(msg.startswith("[dummySection]" + " section not found - ")) + + os.remove("dummyFile.cfg") + + + def testNoOptionInConfigFile (self): + exceptionExpected = None + MockConfigFile("dummyConfig.cfg",{}) + configChecker = ConfigChecker("blaster_config",{"dummy":""}) + try : + configChecker.check("dummyConfig.cfg") + except ConfigException, ce: + exceptionExpected = ce + + self.assertTrue(exceptionExpected != None) + msg = exceptionExpected.messages[0] + self.assertTrue(msg.startswith("[blaster_config] - No option 'dummy' in section: 'blaster_config'")) + os.remove("dummyConfig.cfg") + + +class MockConfigFile: + + def __init__ (self, fileName, optionsDict): + self._fileName = fileName + config = open(fileName, "w"); + config.write("[blaster_config]\n") + for key in optionsDict.keys(): + config.write(key + ":" + optionsDict[key] + "\n") + config.close() + + +test_suite = unittest.TestSuite() +test_suite.addTest( unittest.makeSuite( Test_ConfigChecker ) ) +if __name__ == "__main__": + unittest.TextTestRunner(verbosity=2).run( test_suite )