view commons/tools/tests/Test_pathnum2id.py @ 31:0ab839023fe4

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import unittest
import os
from commons.core.utils.FileUtils import FileUtils


class Test_pathnum2id( unittest.TestCase ):
    
    def setUp( self ):
        self._inputFileName = "dummyInputPathFile"
        self._outputFileName = "dummyOutputPathFile"
        self._expectedFileName = "dummyExpectedPathFile"
        self._prg = "pathnum2id.py"
        
        
    def test_runWhithoutReturnAtEndOfFile( self ):
        cDir = os.getcwd()
        
        self._createAndFillInputFileWhithoutReturnAtTheEnd()
        self._createExpectedFile()
        cmd = self._prg
        cmd += " -i %s" % ( self._inputFileName )
        cmd += " -o %s" % ( self._outputFileName )
        os.system( cmd )        
        self.assertTrue( FileUtils.are2FilesIdentical( self._outputFileName, self._expectedFileName ) )
        
        os.remove( self._inputFileName )
        os.remove( self._expectedFileName )
        if os.path.exists( self._outputFileName ):
            os.remove( self._outputFileName )
        os.chdir( cDir )
        
        
    def test_runWhithReturnAtEndOfFile( self ):
        cDir = os.getcwd()
        
        self._createAndFillInputFileWhithReturnAtTheEnd()
        self._createExpectedFile()
        cmd = self._prg
        cmd += " -i %s" % ( self._inputFileName )
        cmd += " -o %s" % ( self._outputFileName )
        os.system( cmd )        
        self.assertTrue( FileUtils.are2FilesIdentical( self._outputFileName, self._expectedFileName ) )
        
        os.remove( self._inputFileName )
        os.remove( self._expectedFileName )
        if os.path.exists( self._outputFileName ):
            os.remove( self._outputFileName )
        os.chdir( cDir )
        
        
    def _createExpectedFile( self ):
        f = open(self._expectedFileName, "w")
        f.write("1\tblumeria_Grouper_590_20:NoCat_1\t91\t108\tDUF234\t5\t22\t1.5\t3.2\t0\n")
        f.write("2\tblumeria_Grouper_590_20:NoCat_1\t111\t119\tDUF1414\t1\t9\t6.3\t2.9\t0\n")
        f.write("3\tblumeria_Grouper_590_20:NoCat_3\t30\t37\tCPW_WPC\t1\t9\t7.7\t1.5\t0\n")
        f.write("4\tblumeria_Grouper_590_20:NoCat_3\t55\t69\tHECT\t341\t355\t9.2e-06\t0.0\t0\n")
        f.write("5\tblumeria_Grouper_590_20:NoCat_4\t82\t91\tDUF46\t173\t182\t0.11\t6.4\t0\n")
        f.write("6\tblumeria_Grouper_590_20:NoCat_5\t121\t125\tPOC4\t276\t280\t6.3\t-1.7\t0\n")
        f.close()
        
        
    def _createAndFillInputFileWhithoutReturnAtTheEnd( self ):
        f = open(self._inputFileName, "w")
        f.write("1\tblumeria_Grouper_590_20:NoCat_1\t91\t108\tDUF234\t5\t22\t1.5\t3.2\t0\n")
        f.write("2\tblumeria_Grouper_590_20:NoCat_1\t111\t119\tDUF1414\t1\t9\t6.3\t2.9\t0\n")
        f.write("3\tblumeria_Grouper_590_20:NoCat_3\t30\t37\tCPW_WPC\t1\t9\t7.7\t1.5\t0\n")
        f.write("1\tblumeria_Grouper_590_20:NoCat_3\t55\t69\tHECT\t341\t355\t9.2e-06\t0.0\t0\n")
        f.write("2\tblumeria_Grouper_590_20:NoCat_4\t82\t91\tDUF46\t173\t182\t0.11\t6.4\t0\n")
        f.write("3\tblumeria_Grouper_590_20:NoCat_5\t121\t125\tPOC4\t276\t280\t6.3\t-1.7\t0")
        f.close()
        
        
    def _createAndFillInputFileWhithReturnAtTheEnd( self ):
        f = open(self._inputFileName, "w")
        f.write("1\tblumeria_Grouper_590_20:NoCat_1\t91\t108\tDUF234\t5\t22\t1.5\t3.2\t0\n")
        f.write("2\tblumeria_Grouper_590_20:NoCat_1\t111\t119\tDUF1414\t1\t9\t6.3\t2.9\t0\n")
        f.write("3\tblumeria_Grouper_590_20:NoCat_3\t30\t37\tCPW_WPC\t1\t9\t7.7\t1.5\t0\n")
        f.write("1\tblumeria_Grouper_590_20:NoCat_3\t55\t69\tHECT\t341\t355\t9.2e-06\t0.0\t0\n")
        f.write("2\tblumeria_Grouper_590_20:NoCat_4\t82\t91\tDUF46\t173\t182\t0.11\t6.4\t0\n")
        f.write("3\tblumeria_Grouper_590_20:NoCat_5\t121\t125\tPOC4\t276\t280\t6.3\t-1.7\t0\n")
        f.close()
        
if __name__ == "__main__":
        unittest.main()