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view SMART/galaxy/restrictSequenceList.xml @ 6:769e306b7933

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author yufei-luo
date Fri, 18 Jan 2013 04:54:14 -0500
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<tool id="restrictSequenceList" name="restrict sequence list">
  <description>Keep the elements of a list of sequences whose name is mentionned in a given file.</description>
  <command interpreter="python"> ../Java/Python/restrictSequenceList.py -i $inputFile -f fasta -n $name -o $outputFile </command>
  
  <inputs>
	<param name="inputFile" type="data" label="Input fasta File" format="fasta"/>
	<param name="name" type="data" label="The txt file contains the names of the transcripts." format="txt"/> 
  </inputs>

  <outputs>
    <data format="fasta" name="outputFile" label="[restrictSequenceList] Output File"/>
  </outputs>

  <help>
  </help>
</tool>