view smart_toolShed/commons/core/seq/test/ @ 0:e0f8dcca02ed

Uploaded S-MART tool. A toolbox manages RNA-Seq and ChIP-Seq data.
author yufei-luo
date Thu, 17 Jan 2013 10:52:14 -0500
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#!/usr/bin/env python

# Copyright INRA (Institut National de la Recherche Agronomique)
# This software is governed by the CeCILL license under French law and
# abiding by the rules of distribution of free software.  You can  use, 
# modify and/ or redistribute the software under the terms of the CeCILL
# license as circulated by CEA, CNRS and INRIA at the following URL
# "". 
# As a counterpart to the access to the source code and  rights to copy,
# modify and redistribute granted by the license, users are provided only
# with a limited warranty  and the software's author,  the holder of the
# economic rights,  and the successive licensors  have only  limited
# liability. 
# In this respect, the user's attention is drawn to the risks associated
# with loading,  using,  modifying and/or developing or reproducing the
# software by the user in light of its specific status of free software,
# that may mean  that it is complicated to manipulate,  and  that  also
# therefore means  that it is reserved for developers  and  experienced
# professionals having in-depth computer knowledge. Users are therefore
# encouraged to load and test the software's suitability as regards their
# requirements in conditions enabling the security of their systems and/or 
# data to be ensured and,  more generally, to use and operate it in the 
# same conditions as regards security. 
# The fact that you are presently reading this means that you have had
# knowledge of the CeCILL license and that you accept its terms.

import unittest
import sys
import Test_AlignedBioseqDB
import Test_Bioseq
import Test_BioseqDB
import Test_BioseqUtils
import Test_FastaUtils

def main():
        TestSuite_seq = unittest.TestSuite()
        TestSuite_seq.addTest( unittest.makeSuite( Test_AlignedBioseqDB.Test_AlignedBioseqDB, "test" ) )
        TestSuite_seq.addTest( unittest.makeSuite( Test_Bioseq.Test_Bioseq, "test" ) )
        TestSuite_seq.addTest( unittest.makeSuite( Test_BioseqDB.Test_BioseqDB, "test" ) )
        TestSuite_seq.addTest( unittest.makeSuite( Test_BioseqUtils.Test_BioseqUtils, "test" ) )
        TestSuite_seq.addTest( unittest.makeSuite( Test_FastaUtils.Test_FastaUtils, "test" ) )
        runner = unittest.TextTestRunner( sys.stderr, 2, 2 ) TestSuite_seq )

if __name__ == "__main__":