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Repository data_manager_build_kraken_database

Name: data_manager_build_kraken_database

Owner: devteam

Synopsis: Contains a data manager that defines and populates the kraken_databases tool data table.

Detailed description:

Kraken is a system for assigning taxonomic labels to short DNA
sequences, usually obtained through metagenomic studies. Previous attempts by other
bioinformatics software to accomplish this task have often used sequence alignment
or machine learning techniques that were quite slow, leading to the development
of less sensitive but much faster abundance estimation programs. Kraken aims to
achieve high sensitivity and high speed by utilizing exact alignments of k-mers
and a novel classification algorithm.

Content homepage: https://github.com/galaxyproject/tools-iuc/

Development repository: https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_kraken_database/

Link to this repository: https://toolshed.g2.bx.psu.edu/view/devteam/data_manager_build_kraken_database/1bf0dd016994

Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/devteam/data_manager_build_kraken_database

Type: unrestricted

Revision: 7:1bf0dd016994

This revision can be installed: True

Times cloned / installed: 3220

Contents of this repository

Name	Description	Version	Minimum Galaxy Version
Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Kraken View tool metadata	database builder	1.1.1	16.01

Data Managers
Name	Version	Data Tables
kraken_database_builder	0.0.1	kraken_databases

Data Managers

Name

Version

Data Tables

kraken_database_builder

0.0.1

kraken_databases