Authors Don Gilbert software@bio.indiana.edu
Please cite If you use this tool, please cite Don Gilbert software@bio.indiana.edu
Galaxy integration Andres Gwendoline, Institut Français de Bioinformatique.
Support For any questions about Galaxy integration, please send an e-mail to support.abims@sb-roscoff.fr
Compute a phylip tree from a fasta alignment.
Upstream tools
Name | output file(s) | format |
---|---|---|
Downstream tools
Name | output file(s) | format |
---|---|---|
fastme | Newick tree | Newick |
Rooting | out tree | Newick |
>IRAT112 GAGAACCGTCCTGTAAGTACTCTTGCTTTAAGTAATAAAGTAATACTAATCCATGACGCTTAAGTCGAAGAGAGAATAAGTCAATATTTAATTGGACTCATCGCTTATTATCATTATGAATCAATAAACAACTTGATGTTGTGCTCCATGTACGATATATAAAGACAGATA >KARASUKARASURANKASU GAGAACCGTCCTGTAAGTACTCTTGCTTTAAATACGAAAGTAATACTAATCCATGACGCTTAAGTCGAAGAGAGAATAAGTCAATATTTAATTGGACTCATCGCTTATGTTCATCATGAATCTATAGTTAACTTGATGTTGTGCTCCATGTACGATATAAAAAGTTAGATA
Output name -> phylip conversion
168 5125 IRAT112 GAGAACCGTC CTGTAAGTAC TCTTGCTTTA AGTAATAAAG TAATACTAAT KARASUKARA GAGAACCGTC CTGTAAGTAC TCTTGCTTTA AATACGAAAG TAATACTAAT