Galaxy | Tool Preview

IMGT Loader (version 1.0)

INPUT

This tool accepts an IMGT/HIGHV-QUEST ZIP file

OUTPUT

The following data is used for ARGalaxy

Column name Column contents
ID The Sequence ID provided by the sequencer.
VDJ Frame In-frame/Out-frame
Top V Gene The best matching V gene found.
Top D Gene The best matching D gene found.
Top J Gene The best matching J gene found.
CDR3 Seq The CDR3 region.
CDR3 Length The length of the CDR3 region.
CDR3 Seq DNA The CDR3 sequence region.
CDR3 Length DNA The length of the CDR3 sequence region.
Functionality If sequence is productive/unproductive