INPUT
This tool accepts an IMGT/HIGHV-QUEST ZIP file
OUTPUT
The following data is used for ARGalaxy
Column name | Column contents |
ID | The Sequence ID provided by the sequencer. |
VDJ Frame | In-frame/Out-frame |
Top V Gene | The best matching V gene found. |
Top D Gene | The best matching D gene found. |
Top J Gene | The best matching J gene found. |
CDR3 Seq | The CDR3 region. |
CDR3 Length | The length of the CDR3 region. |
CDR3 Seq DNA | The CDR3 sequence region. |
CDR3 Length DNA | The length of the CDR3 sequence region. |
Functionality | If sequence is productive/unproductive |