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IDMerger (version 3.1+galaxy0)

Run tool in batch mode for -in:

Input files separated by blanks (all must have the same type):

select idxml,sqlite data sets(s)

Output file type (default: determined from file extension):

Optional input file:

IDs from 'in' are added to this file, but only if the (modified) peptide sequences are not present yet (considering only best hits per spectrum) select idxml data sets(s)

Store the original filename in each protein/peptide identification (meta value: 'file_origin') - idXML input/output only:

Merge idXML files derived from a pepXML and corresponding protXML file:

Exactly two input files are expected in this case. Not compatible with 'add_to'

Merge all identified proteins by accession into one protein identification run but keep all the PSMs with updated links to potential new protein ID#s:

Not compatible with 'add_to'

Advanced Options

Advanced Options 0

Optional outputs:

Merges several protein/peptide identification files into one file.

For more information, visit https://openms.de/doxygen/release/3.1.0/html/TOPP_IDMerger.html