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khmer: Abundance Distribution (version 3.0.0a3+galaxy2)

the k-mer countgraph to query:

The abundances of the k-mers in the input nucleotide sequence file will be calculated using the kmer counts in this k-mer countgraph.

Sequence in FASTA or FASTQ format:

zero:

Output zero count bins

bigcount:

Count k-mers past 255 occurences

Calculate abundance distribution of the k-mers in the sequence file using a pre-made k-mer countgraph.