What it does
This tool from PAMPA toolsuite computes community metrics from abundance data:
Input description
A tabular file with observation data. Must at least contain three columns 'observation.unit' which associate year and location or 'year' and 'location', 'species.code' with species ID and 'number' for abundance.
observation.unit | species.code | number |
---|---|---|
site_yearID | speciesID | 4 |
... | ... | ... |
OR
year | location | species.code | number |
---|---|---|---|
2000 | locationID | speciesID | 4 |
... | ... | ... | ... |
The data frame may also contain:
Output
A tabular file with every metrics selected computed per observation unit
Source
Derived from PAMPA scripts (https://wwz.ifremer.fr/pampa/Meth.-Outils/Outils) written by Yves Reecht.