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obiconvert (version 1.2.13)

Input sequences file:

database used for the in silico PCR. The database must be in the ecoPCR format (for example output of obiconvert)

ecoPCR taxonomy database:

NCBI taxonomy dump repository:

Input format options

Input format options 0

Output data type:

For FASTA/Q the the default output type is the same as the input type

Do you want to create an ecoPCR database from sequence records results?:

Use this option if you want to generate an ecoPCR database output file

Do you want to print sequences in upper case?:

What it does

obiconvert converts sequence files to different output formats. See the documentation for more details on the different formats.

Input files can be in :

fasta format

extended OBITools fasta format

Sanger fastq format

Solexa fastq format

ecoPCR format

ecoPCR database format

GenBank format

EMBL format

obiconvert converts those files to the :

extended OBITools fasta format

Sanger fastq format

ecoPCR database format

If no file name is specified, data is read from standard input.

Project links:

OBITools