Galaxy |

Helical Wheel (version 1.0)

Paste in exact sequence to be plotted:

Label Start Number:

starting residue number to use for labels

Amino Acid Text Size:

Alters the Text Size. Default is 32

Rotation:

Rotates the helical wheel. Default is 90

Label Numbering Text:

number schema subscripts

nonpolar ; hydrophobics

nonpolar ; hydrophobic 0

polar ; unchargeds

polar ; uncharged 0

polar ; acidic (negatively charged)s

polar ; acidic (negatively charged) 0

polar ; basic (positive charge)s

polar ; basic (positive charge) 0

What it does INPUT : Peptide Sequence PARAMETERS : primary parameters : > Paste in exact sequence to be plotted - Input Sequence of desired helical wheel plot > Label Start Number - Numerical value that represents the beginning of the sequence (default 1) > Amino Acid Text Size - Size of text for helical wheel (default 32) > Rotation - Degrees to rotate helical wheel (defaul 90) color parameters : > Background Color and Text Color Selections METHOD : Using the core features from the modlAMP python module, a helical wheel projection is constructed. OUTPUT : _helicalWheel.png NOTES : Peptide lengths longer than 36 residues will not properly graph.