Galaxy |

Merqury histogram plot (version 1.3+galaxy4)

input1:

Width of plot:

Height of plot:

Maximum limit for k-mer multiplicity (leave 0 for default):

default: (x where y=peak) * 2.1

Maximum limit for k-mer count (leave 0 for default):

default: (y where y=peak) * 1.1

Assembly only counts:

.only.hist file

Solid k-mer cutoffs:

cutoff.txt file

Output format:

Type of plot (default all):

Purpose Make spectra-cn plots. Line, filled, and stacked spectra-cn plots will be generated. Inputs : Histogram files generated by merqury.