Peptide Genomic Coodinate

Gets genomic coordinate of peptides based on the information in mzsqlite and genomic mapping sqlite files. This tool is useful in a proteogenomics workflow. This program loads two sqlite databases (mzsqlite and genomic mapping sqlite files) and calculates the genomic coordinates of the peptides provided as input. This outputs bed file for peptides.

Input: Peptide list file, mzsqlite sqlite DB file, and genomic mapping sqlite DB file Output: Tabular BED file with all the columns