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Chado load trees (version 2.3.9+galaxy0)
Chado Database:
If you select 'Remote database' make sure credentials are defined in environment variables
Analysis:
Input type:
Newick:
Newick file to load
Name:
The name given to the phylotree entry in the database
Xref Accession:
The accession to use for dbxrefs for the trees (assumed same as name unless otherwise specified)
Xref db:
The name of the db to link dbxrefs for the trees
Match On Name:
Match polypeptide features using their name instead of their uniquename
Prefix:
Comma-separated list of prefix to be removed from identifiers (e.g species prefixes when loading OrthoFinder output)
Run this only after the following dataset is ready:
Use this if you want to delay the job execution until some data is already loaded. The selected dataset will not be used for anything else.
Load a phylogenetic tree (Newick format) into Chado db