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Generate CPM, TPM, RPK (version 0.4.0)

What it does

Takes a raw count expression matrix and returns a table of normalized expression values.

Normalization can be:

RPK and TPM require a two-column correspondance table gene_name - gene length where the length is specified in nucleotide. Both these metrics are relevant only for sequencing of full length RNAs.

Note: do not comment you header line if you have header line in you tabular input (ie do not start the header line with a '#' character)

Computed values may be log-transformed (log2([CPM or RPK or TPM]+1))