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MaxQuant (version
Input Options
Input Options 0
Search Options
Search Options 0
Protein quantifications
Protein quantification 0
Parameter Groups
Parameter Group 0
Output Options
Output Options 0

MaxQuant is a quantitative proteomics software package designed for analyzing large mass-spectrometric data sets.

This tool is a wrapper for MaxQuant v2.0.3.0. The current version of the wrapper only supports a reduced set of parameters, but another version of the tool that gets its parameters directly from a mqpar.xml file is available, too.

Input files

Parameter Options

Output files

Different output file options are available, most of them are part of the MaxQuant txt directory.