What it does

Identifies telomeres using a default vertebrate repeat sequence CCCTAA, or a user supplied one

Usage: seqtk telo [options] <in.fq>
Options:
-m STR     motif [CCCTAA]
-p INT     penalty [1]
-d INT     max drop [2000]
-s INT     min score [300]
-P         print scoring

Attribution

This Galaxy tool relies on the seqtk toolkit from lh3/seqtk, developed by Heng Li at the Broad Institute