Galaxy | Tool Preview

Monocle3 plotCells (version 0.1.5+galaxy1)
For adding more than one gene, write them as a comma separated list, with no spaces in the middle, like `crp1,crp2,cycX`.

Monocle3 cell plotting (plot_cells)

Display various information about cells (clustering, pseudotime, the inferred graph, user-provided annotations, gene expression) in reduced dimensions.

More information can be found at and

Version history 0.1.5+galaxy1: Updated to monocle3-cli 0.0.9 for plot cells to allow for multiple genes plotting.

0.1.5+galaxy0: Updated to monocle3-cli 0.0.8 to add top marker genes and fix container plots for plotCells (only those two modules upgraded).

0.1.4+galaxy0: Updated to monocle3-cli 0.0.7 to fix bug with column headers in tsv.

0.1.3+galaxy0: Updated to monocle3-cli 0.0.5 to fix bug with tsv inputs.

0.1.2+galaxy0: Initial version based on monocle3-cli 0.0.3 and monocle3 0.1.2