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Venn (version 1.39.5.0)

Generate Heatmap for:

shared - OTU Shared:

calc - Calculators (Uses defaults if none selected):

label - OTU Labels:

groups - Groups to consider:

nseqs - Output the number of sequences represented by the otus in the picture:

permute - Create pictures with all possible 4-way permutations of groups:

fontsize - Fontsize (default is 24):

sharedotus - This parameter can be used with the sharedsobs calculator to get the names of the OTUs in each section of the venn diagram. Default=T:

Output logfile?:

Mothur Overview

Mothur is a comprehensive suite of tools for microbial ecology community. It is initiated by Dr. Patrick Schloss and his software development team in the Department of Microbiology and Immunology at The University of Michigan. For more information, see Mothur-Wiki.

Command Documentation

The venn command generates Venn diagrams to compare the richness shared among 2, 3, or 4 groups. For calc parameter choices see: https://www.mothur.org/wiki/Calculators