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MSstats (version 4.0.0+galaxy1)
dataProcess Options
dataProcess Options 0

MSstats is an open-source R package for statistical relative quantification of proteins and peptides in global, targeted and data-independent proteomics. More information on MSstats

The MSstats Galaxy tool (version 4.0.0) allows the detection of differentially abundant proteins for label-free MS experiments with complex designs on data derived from open-source proteomics software available in Galaxy (e.g. MaxQuant, OpenMS, OpenSWATH). Processing functionalities such as log transformation, normalization, feature selection, missing value imputation and quantification are available as well.

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For additional help please visit the MSstats documentation