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Phase VCF (version 1.0.0.1)

VCF Input:

Model Input:

Select Model:

Phase Algorithm:

Burn-in iterations:

Post burn-in iterations:

Model states for genotype estimation:

Sliding window size (cM):

Overlap between neighboring sliding windows (cM):

HMM allele mismatch probability:

Step length (cM):

Used for identifying short IBS segments

Number of consecutive steps:

Used for identifying long IBS segments

Common Parameters

Common Parameters 0

Output Format:

VCF Phaser Help Text