Galaxy |

GNPSExport (version 3.1+galaxy0)

Input consensusXML file containing only consensusElements with "peptide" annotations:

select consensusxml data sets(s)

Run tool in batch mode for -in_mzml:

Original mzml files containing the ms2 spectra (aka peptide annotation):

Must be in order that the consensusXML file maps the original mzML files select mzml data sets(s)

specificity of mgf output information:

Number of most intense peptides to consider per consensus element; '-1' to consider all identifications:

Bin size (Da) for fragment ions when merging ms2 scans:

Options for exporting mgf file with merged spectra per consensusElements

Options for exporting mgf file with merged spectra per consensusElement 0

Advanced Options

Advanced Options 0

Optional outputs: