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Variant selection with KGGSeq (version 1.5)

VCF Variant file (--vcf-file):

Coordinates must refer to hg19

Pedigree (--ped-file):

Composite subject ID (--composite-subject-id):

Database(s) to annotate and filter variants (--db-gene):

Specify variant and genotype quality filters?:

Specify genetic inheritance?:

Specify homozygosity filters?:

Specify gene feature filters?:

Specify filters by allele frequency?:

Specify variant type, region and gene filtering?:

Specify functional impact filters?:

Add annotations?:

What it does

This tool uses KGGSeq to filter and prioritize genetic variants from sequencing data.

License and citation

You can use this tool only if you agree to the license terms of: KGGSeq.

If you use this tool, please cite: